Thus, I ask if you can give me any hint by answering to one of the two questions or even both or even if there is a third way to solve that I ignore. gp file is not something that I can create before running the mummerplot command.īelow I report, respectively, my plot and the plot of the example (whose aesthetics I would like to imitate): But how can I do it if running mummerplot to generate my plot I obtain the.
#GNUPLOT LINE THICKNESS MANUAL#
gp file writing it as the one of the example and obtain the plot as I want it, as also the manual suggests. and grid lines and the like - you can also use them for plotting. Gnuplot offers a variety of commands to set line and point properties, including color, thickness, point shape, etc. gp file of the example that I linked above (the one here). Youve been peeking at PostScript output generated by gnuplot. gp file has some differences with respect to the. Line thickness, color, and many other options can be added or removed from the plot by hand editing the gnuplot script. These may differ in color, in thickness, in dot/dash pattern, or in some combination of color. reset h (x) xxx-5xx+x+20 a 0.05 b-0.5 unset colorbox set iso 2, 2 set table 'thickbg.dat' sp 0:5 0:30 y unset table. and here is the script that produced the image.
This script contains the commands necessary to generate the plot, and refers to the two data files which contain the forward and reverse matches respectively. Each gnuplot terminal type provides a set of distinct linetypes. In this section, I will discuss how we can give the impression that a 2D plot is in 3D, simply by adding a slight shadow to a curve. The first of which is the gnuplot script. rplot, when run with standard parameters. Line thickness, color, and many other options can be added or removed from the plot by hand editing the gnuplot script. The mummerplot script outputs three files. If you want to have a look at the code and give me some suggestions, it is available on Github.Ģ.But I wonder also if it is the only way to adjust the mummerplot plot.
I tried to modify some lines of code but with no success.
#GNUPLOT LINE THICKNESS PORTABLE#
However, the code is written in C/C++, so not really easy for me. 50 line thickness, 45 second y-axis, 51 Portable document format, 215 Poster, 158 decomposition, 169 Preamble, 1 Python, 25, 34 G Gnuplot, 72 Grid lines. Since my command lines that I use to make the plot are the same as the one of the example that I found on web, I think that I should modify the mummerplot code to fix this problem. mummer so that you can understand what I mean). )) or may be defined here by providing values for 55linetype66 (an index from the default list of styles) and/or 55linewidth66 (which is a multiplier for the default width).
#GNUPLOT LINE THICKNESS HOW TO#
I obtain a plot that is consistent with what I expected but I do not understand why it does not show the axis scales (or labels ? I do not know how to explain but I report below my plot vs the plot made in the MUMmer page example 2.1. The line style may be selected from a user-defined list of line styles (see set style line (p. I runned the same command lines that I wrote in this question post What is the file. I was trying to make a dotplot to visualize genome-genome sequence alignment by using the MUMmer 3 software.
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